Pipeline for 3D Seqmentation and Analysis of Biological Sample Images

We are releasing the code for “Parismi” - our 3D image segmentation and cell cycle analysis pipeline so that the results reported in our publications can easily be reproduced, and to enable researchers to utilize and/or modify this tool for other applications.

A high-resolution annotated image dataset of 45,000 cells is also avaible.

 

Center/Contributor: Center for Complex Biological Systegs

Contact: Olivier Cinquin

2011 Pipeline for 3D Seqmentation and Analysis of Biological Sample Images. Copyright © 2013. The Center for Complex Biological Systems, UC Irvine
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